STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96750.1Binding-protein-dependent transporters inner membrane component; COG1175 ABC-type sugar transport systems, permease components. (312 aa)    
Predicted Functional Partners:
AEN96749.1
Binding-protein-dependent transporters inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
  0.993
AEN96752.1
Extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
  0.981
AEN95951.1
ABC transporter membrane spanning protein (sugar); COG0395 ABC-type sugar transport system, permease component.
 
   0.869
AEN97157.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
   0.868
AEN97413.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
   0.862
AEN97257.1
ABC transporter transmembrane protein; COG3833 ABC-type maltose transport systems, permease component.
 
 
 0.858
AEN95760.1
Binding-protein-dependent transporters inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
   0.857
AEN95169.1
COG0395 ABC-type sugar transport system, permease component.
 
 
 0.856
AEN95943.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
   0.853
AEN96612.1
COG0395 ABC-type sugar transport system, permease component.
 
   0.853
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.