Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN96752.1Extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component. (461 aa)    
Predicted Functional Partners:
AEN96749.1
Binding-protein-dependent transporters inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
  0.983
AEN96750.1
Binding-protein-dependent transporters inner membrane component; COG1175 ABC-type sugar transport systems, permease components.
 
  0.981
AEN96751.1
Glucosyl hydrolase family protein.
 
    0.883
AEN96747.1
Xylose isomerase domain-containing protein; COG1082 Sugar phosphate isomerases/epimerases.
 
    0.754
AEN96748.1
Glycoside hydrolase family 28; COG5434 Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family.
 
   
 0.753
AEN96963.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 
 0.593
AEN97049.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 
 0.593
AEN96746.1
Hypothetical protein.
 
    0.592
AEN95949.1
Extracellular solute-binding protein family 1; COG1653 ABC-type sugar transport system, periplasmic component.
  
     0.578
AEN95951.1
ABC transporter membrane spanning protein (sugar); COG0395 ABC-type sugar transport system, permease component.
 
   0.522
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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