STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN96762.1Hypothetical protein. (149 aa)    
Predicted Functional Partners:
AEN96763.1
Hypothetical protein.
 
     0.950
AEN96764.1
Hypothetical protein; COG0459 Chaperonin GroEL (HSP60 family).
 
     0.855
AEN96765.1
NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family.
 
     0.744
AEN97461.1
Hypothetical protein.
  
     0.739
AEN98244.1
Hypothetical protein.
  
     0.725
rpoZ
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
     0.709
AEN97385.1
Hypothetical protein.
  
     0.706
AEN98272.1
Hypothetical protein; COG4862 Negative regulator of genetic competence, sporulation and motility.
  
     0.705
AEN97590.1
Hypothetical protein.
  
     0.689
AEN96244.1
Hypothetical protein.
  
    0.680
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.