Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN96830.1ATPase; COG1672 Predicted ATPase (AAA+ superfamily). (454 aa)    
Predicted Functional Partners:
AEN96829.1
COG0550 Topoisomerase IA.
 
     0.683
AEN95586.1
Hypothetical protein.
  
     0.527
AEN97062.1
Hypothetical protein.
  
     0.508
AEN95396.1
Hypothetical protein.
  
     0.466
AEN96694.1
Hypothetical protein.
  
     0.464
AEN95313.1
COG1345 Flagellar capping protein.
  
     0.462
AEN96834.1
Hypothetical protein; COG0438 Glycosyltransferase.
 
     0.459
AEN95700.1
Hypothetical protein.
  
     0.443
cysS
COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.443
AEN96515.1
Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.440
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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