STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN96908.1Transporter permease; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (336 aa)    
Predicted Functional Partners:
AEN96909.1
Periplasmic binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.997
AEN96907.1
Ferric enterobactin transport ATP-binding protein fepC; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
 
 0.996
AEN95145.1
Phosphonate-transporting ATPase; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
 
 0.962
AEN95147.1
COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.962
AEN96054.1
Hypothetical protein.
  
 
 0.922
AEN96910.1
COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase.
 
     0.905
AEN96912.1
precorrin-6Y C(5,15)-methyltransferase; COG2099 Precorrin-6x reductase.
  
  
 0.729
AEN96906.1
Sirohydrochlorin cobaltochelatase; COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase.
  
    0.690
AEN96905.1
Putative metal-binding protein; COG2158 Uncharacterized protein containing a Zn-finger-like domain.
 
     0.666
deoB
Hypothetical protein; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
       0.575
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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