Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96984.1Hypothetical protein. (502 aa)    
Predicted Functional Partners:
AEN96985.1
COG3655 Predicted transcriptional regulator.
       0.839
AEN96391.1
Diguanylate cyclase/phosphodiesterase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
 0.811
AEN96986.1
Hypothetical protein.
 
     0.743
AEN95379.1
PAS/PAC sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver.
  
 
 0.669
AEN96983.1
Class II aldolase/adducin family protein; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
       0.620
AEN96982.1
COG1454 Alcohol dehydrogenase, class IV.
  
    0.600
AEN95919.1
Hypothetical protein.
  
     0.513
AEN96964.1
Hypothetical protein.
  
     0.448
AEN96340.1
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
 
 
 0.413
AEN96797.1
Hypothetical protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
  
     0.407
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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