Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN97015.1L-carnitine dehydratase/bile acid-inducible protein F; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. (404 aa)    
Predicted Functional Partners:
AEN97016.1
L-carnitine dehydratase/bile acid-inducible protein F; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
 
    
0.811
AEN97013.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
 0.804
AEN97012.1
COG1960 Acyl-CoA dehydrogenases.
 
 
 0.764
AEN97014.1
COG0491 Zn-dependent hydrolases, including glyoxylases.
  
    0.646
caiC
Putative crotonobetaine/carnitine-CoA ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
  
 0.624
AEN97009.1
COG1960 Acyl-CoA dehydrogenases.
 
 0.604
AEN96798.1
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
 
  
 0.472
AEN97011.1
COG2086 Electron transfer flavoprotein, beta subunit.
       0.416
AEN97018.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 
     0.411
AEN97010.1
COG2025 Electron transfer flavoprotein, alpha subunit.
       0.405
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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