Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN97048.1CdaR family transcriptional regulator; COG2508 Regulator of polyketide synthase expression. (364 aa)    
Predicted Functional Partners:
AEN96211.1
Hypothetical protein; COG1925 Phosphotransferase system, HPr-related proteins.
  
     0.757
AEN96575.1
Phosphotransferase system, HPr-like protein.
  
     0.680
AEN97461.1
Hypothetical protein.
  
     0.610
AEN98272.1
Hypothetical protein; COG4862 Negative regulator of genetic competence, sporulation and motility.
  
     0.590
AEN97047.1
Transcriptional regulator; COG4624 Iron only hydrogenase large subunit, C-terminal domain.
       0.588
AEN98244.1
Hypothetical protein.
  
     0.570
AEN97376.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.544
AEN97049.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
       0.525
AEN96762.1
Hypothetical protein.
  
     0.518
AEN97590.1
Hypothetical protein.
  
     0.482
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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