STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97059.1Hypothetical protein; COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family. (119 aa)    
Predicted Functional Partners:
AEN97058.1
Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.826
AEN96497.1
COG0606 Predicted ATPase with chaperone activity.
 
  
 0.803
AEN96498.1
COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
 
  
 0.719
AEN97061.1
Flagellar biosynthesis; COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB.
       0.675
AEN97593.1
COG1040 Predicted amidophosphoribosyltransferases.
 
    0.646
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.613
AEN97065.1
COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
  
    0.582
AEN97064.1
Ribosomal biogenesis GTPase; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.575
AEN97057.1
Glutamyl aminopeptidase M42 family protein; COG1363 Cellulase M and related proteins.
       0.554
AEN97062.1
Hypothetical protein.
  
    0.538
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.