Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97095.1Hypothetical protein; COG0438 Glycosyltransferase. (410 aa)    
Predicted Functional Partners:
AEN95281.1
COG4641 Uncharacterized protein conserved in bacteria.
  
     0.769
AEN95313.1
COG1345 Flagellar capping protein.
  
     0.768
AEN95312.1
Spore maturation protein CgeB; COG4641 Uncharacterized protein conserved in bacteria.
  
     0.766
AEN97362.1
Hypothetical protein.
  
     0.763
AEN95263.1
Spore maturation protein CgeB; COG4641 Uncharacterized protein conserved in bacteria.
  
     0.762
AEN95264.1
Spore maturation protein CgeB; COG4641 Uncharacterized protein conserved in bacteria.
  
     0.760
AEN95274.1
COG4641 Uncharacterized protein conserved in bacteria.
  
     0.760
AEN95586.1
Hypothetical protein.
  
     0.752
AEN96547.1
COG1664 Integral membrane protein CcmA involved in cell shape determination.
  
     0.748
AEN97924.1
Hypothetical protein.
  
     0.744
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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