STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN97149.1Cysteine desulfurase, SufS subfamily protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (402 aa)    
Predicted Functional Partners:
AEN97148.1
Nitrogen fixation protein NifU-like protein; COG0822 NifU homolog involved in Fe-S cluster formation.
 
 
 0.998
AEN97150.1
Hypothetical protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 0.998
AEN97151.1
COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 
 0.996
AEN97152.1
FeS assembly ATPase SufC; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
 
  
 0.996
AEN96043.1
COG0822 NifU homolog involved in Fe-S cluster formation.
  
 0.984
AEN96825.1
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
  
 
 0.950
AEN95549.1
COG0492 Thioredoxin reductase.
  
 
  0.916
AEN97331.1
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
    
 0.912
AEN97995.1
Hypothetical protein.
    
   0.797
AEN96087.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
  
  
 0.664
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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