Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97169.1Relaxase/mobilization nuclease family protein. (475 aa)    
Predicted Functional Partners:
AEN97170.1
Hypothetical protein.
 
    0.896
AEN97172.1
Hypothetical protein.
 
     0.847
AEN97174.1
Hypothetical protein.
 
     0.790
AEN97177.1
Hypothetical protein.
 
     0.778
AEN97828.1
Hypothetical protein.
 
    0.774
AEN97176.1
Hypothetical protein.
 
     0.757
AEN97221.1
Hypothetical protein.
  
     0.754
AEN97817.1
Hypothetical protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
  
     0.753
AEN97162.1
Hypothetical protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
  
     0.752
AEN97224.1
parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
 
    0.738
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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