Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97172.1Hypothetical protein. (194 aa)    
Predicted Functional Partners:
AEN97170.1
Hypothetical protein.
 
     0.925
AEN97173.1
Hypothetical protein.
 
     0.918
AEN97174.1
Hypothetical protein.
 
     0.866
AEN97177.1
Hypothetical protein.
 
     0.852
AEN97169.1
Relaxase/mobilization nuclease family protein.
 
     0.847
AEN97183.1
SpoVG family protein; COG2088 Uncharacterized protein, involved in the regulation of septum location.
 
     0.832
AEN97829.1
Hypothetical protein.
 
     0.778
AEN97841.1
COG2088 Uncharacterized protein, involved in the regulation of septum location.
 
     0.777
AEN97182.1
COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.769
AEN97171.1
Hypothetical protein.
       0.768
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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