STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97205.1RNA polymerase, sigma-24 subunit, ecf subfamily protein. (153 aa)    
Predicted Functional Partners:
AEN97204.1
Hypothetical protein.
 
     0.921
AEN97206.1
Sigma-24 (feci); COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
 
    
0.810
AEN98211.1
Hypothetical protein.
 
     0.763
AEN97197.1
Hypothetical protein.
  
     0.759
AEN98204.1
Hypothetical protein.
  
     0.759
AEN97203.1
Hypothetical protein.
 
     0.665
AEN97218.1
Hypothetical protein.
  
    0.572
AEN98223.1
Hypothetical protein.
  
    0.571
AEN97207.1
RNA polymerase, sigma-24 subunit, ecf subfamily (ecf subfamily RNA polymerase sigma-70 factor); COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
       0.544
AEN97198.1
COG1484 DNA replication protein.
  
    0.485
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.