STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97230.1COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (260 aa)    
Predicted Functional Partners:
AEN97229.1
COG2608 Copper chaperone.
 
    0.774
AEN97661.1
Hypothetical protein.
  
 
   0.649
AEN97231.1
Zinc/iron permease; COG0428 Predicted divalent heavy-metal cations transporter.
   
   0.554
AEN97533.1
Hypothetical protein; COG4778 ABC-type phosphonate transport system, ATPase component.
  
     0.506
AEN95945.1
Hypothetical protein.
  
  
 0.497
AEN95938.1
alpha-L-rhamnosidase.
  
    0.493
AEN96988.1
Hypothetical protein; COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.
 
     0.476
AEN96987.1
COG3864 Uncharacterized protein conserved in bacteria.
  
     0.448
AEN97228.1
Xenobiotic ABC transporter ATPase.
  
   0.438
AEN95677.1
COG1960 Acyl-CoA dehydrogenases.
   
 0.437
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.