Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEN97279.1COG0582 Integrase; Belongs to the 'phage' integrase family. (328 aa)    
Predicted Functional Partners:
AEN97278.1
Type I restriction/modification specificity protein; COG0732 Restriction endonuclease S subunits.
 
     0.790
AEN97280.1
Type I restriction-modification system, specificity protein; COG0732 Restriction endonuclease S subunits.
 
     0.713
AEN97281.1
N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit.
 
   
 0.683
AEN97282.1
COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
 
   
 0.670
AEN97283.1
Hypothetical protein.
       0.470
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
  
    0.467
AEN96696.1
COG0287 Prephenate dehydrogenase.
  
    0.406
AEN97593.1
COG1040 Predicted amidophosphoribosyltransferases.
   
    0.401
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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