STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97313.1Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein. (469 aa)    
Predicted Functional Partners:
AEN97311.1
COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
  
 0.970
AEN97312.1
ABC transporter related protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
  
 0.943
AEN95865.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
  
 0.859
AEN95667.1
ABC transporter ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
 0.839
AEN97447.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
  
 0.831
AEN95864.1
RND family efflux transporter MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.759
AEN97449.1
ABC transporter (ATP-binding protein); COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
  
 0.687
AEN95160.1
Hypothetical protein.
  
 
 0.666
AEN95161.1
Hypothetical protein.
  
 
 0.666
AEN95710.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.666
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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