STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97357.1COG1345 Flagellar capping protein. (259 aa)    
Predicted Functional Partners:
AEN96517.1
Flagellar motor switch protein; COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation.
  
  
 0.875
AEN97363.1
Modulation of CheA activity in response to attractants (chemotaxis protein); COG0835 Chemotaxis signal transduction protein.
  
  
 0.785
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.767
AEN96512.1
COG1749 Flagellar hook protein FlgE.
  
 
 0.694
AEN95251.1
COG1256 Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
  
 
 0.666
AEN95252.1
COG1256 Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
  
 
 0.666
AEN95256.1
COG1334 Uncharacterized flagellar protein FlaG.
  
  
 0.641
AEN96506.1
Na+-transporting two-sector ATPase; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
  
  
 0.639
AEN96505.1
COG1317 Flagellar biosynthesis/type III secretory pathway protein.
  
  
 0.628
AEN96529.1
Putative CheA signal transduction histidine kinase; COG0643 Chemotaxis protein histidine kinase and related kinases.
  
  
 0.628
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.