STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN97362.1Hypothetical protein. (516 aa)    
Predicted Functional Partners:
AEN96508.1
Hypothetical protein.
  
   0.797
AEN96744.1
Hypothetical protein.
 
    0.796
AEN97363.1
Modulation of CheA activity in response to attractants (chemotaxis protein); COG0835 Chemotaxis signal transduction protein.
 
 
 0.788
AEN98278.1
Hypothetical protein.
 
   
 0.787
AEN97062.1
Hypothetical protein.
  
    0.781
AEN95250.1
Hypothetical protein.
  
    0.779
AEN95586.1
Hypothetical protein.
  
  
 0.779
AEN95253.1
Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
 0.778
AEN96519.1
Hypothetical protein.
  
   
 0.778
AEN98269.1
Hypothetical protein.
  
  
 0.776
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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