STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97401.1Sugar ABC transporter substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component. (483 aa)    
Predicted Functional Partners:
AEN97396.1
Glycosidase related protein; COG2152 Predicted glycosylase.
 
   
 0.933
AEN97415.1
Family 1 extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
  
  
  0.933
AEN97400.1
COG1175 ABC-type sugar transport systems, permease components.
 
   0.918
AEN97049.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 0.915
AEN97399.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
   0.888
AEN97413.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
  
  0.881
AEN97414.1
COG1175 ABC-type sugar transport systems, permease components.
  
  0.876
AEN97398.1
N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).
 
   
 0.872
AEN98108.1
Hypothetical protein.
 
   
 0.872
AEN97397.1
Glycosidase related protein; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family.
 
   
 0.864
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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