STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AEN97402.1AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. (316 aa)    
Predicted Functional Partners:
AEN98109.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.790
AEN95182.1
2-isopropylmalate synthase; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.784
AEN96267.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.777
AEN98459.1
Xylan 1,4-beta-xylosidase; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.767
AEN95672.1
Xylan 1,4-beta-xylosidase; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.762
AEN97332.1
Positive regulator for rhaBAD operon; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.756
AEN96282.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.754
AEN97300.1
L-rhamnose operon transcriptional activator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.739
AEN95936.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.737
AEN96331.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.721
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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