STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97416.1Signal transduction histidine kinase, LytS; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. (614 aa)    
Predicted Functional Partners:
AEN97412.1
Two component AraC family transcriptional regulator; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
 
 0.918
AEN95947.1
COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
 
 0.886
AEN96615.1
Two component system response regulator; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
 
 0.866
AEN95902.1
COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
 
 0.859
AEN95831.1
COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
 
 0.857
AEN97415.1
Family 1 extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.818
AEN96272.1
Hypothetical protein; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
 
 0.753
AEN98379.1
COG3279 Response regulator of the LytR/AlgR family.
 
  
 0.742
AEN97388.1
Two-component system, response regulator YesN; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
 
  0.720
AEN98046.1
Two-component system, response regulator YesN; COG2207 AraC-type DNA-binding domain-containing proteins.
 
 
  0.714
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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