STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN97434.1Putative iron-sulfur-binding membrane protein; COG0348 Polyferredoxin. (297 aa)    
Predicted Functional Partners:
AEN96991.1
NADPH-dependent glutamate synthase GltA2; COG1145 Ferredoxin.
  
 
 0.946
AEN97435.1
Alkyl hydroperoxide reductase; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
   
 0.924
AEN97431.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
 
     0.894
AEN97433.1
Hypothetical protein.
       0.833
AEN97432.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
     0.816
AEN98326.1
COG1145 Ferredoxin.
  
 
 0.488
AEN96079.1
COG1342 Predicted DNA-binding proteins; Belongs to the UPF0251 family.
  
  
 0.421
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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