Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEN96065.1 | AEN97466.1 | RHOM_04725 | RHOM_11790 | Regulatory protein GntR HTH; COG2186 Transcriptional regulators. | GntR domain protein; COG1802 Transcriptional regulators. | 0.473 |
AEN97463.1 | AEN97464.1 | RHOM_11775 | RHOM_11780 | Stage II sporulation protein R. | Spore germination protein-like protein YndE. | 0.726 |
AEN97463.1 | AEN97465.1 | RHOM_11775 | RHOM_11785 | Stage II sporulation protein R. | Spore germination protein B1. | 0.898 |
AEN97463.1 | AEN97466.1 | RHOM_11775 | RHOM_11790 | Stage II sporulation protein R. | GntR domain protein; COG1802 Transcriptional regulators. | 0.455 |
AEN97463.1 | ipk | RHOM_11775 | RHOM_11795 | Stage II sporulation protein R. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.478 |
AEN97464.1 | AEN97463.1 | RHOM_11780 | RHOM_11775 | Spore germination protein-like protein YndE. | Stage II sporulation protein R. | 0.726 |
AEN97464.1 | AEN97465.1 | RHOM_11780 | RHOM_11785 | Spore germination protein-like protein YndE. | Spore germination protein B1. | 0.959 |
AEN97464.1 | AEN97466.1 | RHOM_11780 | RHOM_11790 | Spore germination protein-like protein YndE. | GntR domain protein; COG1802 Transcriptional regulators. | 0.540 |
AEN97464.1 | ipk | RHOM_11780 | RHOM_11795 | Spore germination protein-like protein YndE. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.552 |
AEN97465.1 | AEN97463.1 | RHOM_11785 | RHOM_11775 | Spore germination protein B1. | Stage II sporulation protein R. | 0.898 |
AEN97465.1 | AEN97464.1 | RHOM_11785 | RHOM_11780 | Spore germination protein B1. | Spore germination protein-like protein YndE. | 0.959 |
AEN97465.1 | AEN97466.1 | RHOM_11785 | RHOM_11790 | Spore germination protein B1. | GntR domain protein; COG1802 Transcriptional regulators. | 0.567 |
AEN97465.1 | ipk | RHOM_11785 | RHOM_11795 | Spore germination protein B1. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.569 |
AEN97466.1 | AEN96065.1 | RHOM_11790 | RHOM_04725 | GntR domain protein; COG1802 Transcriptional regulators. | Regulatory protein GntR HTH; COG2186 Transcriptional regulators. | 0.473 |
AEN97466.1 | AEN97463.1 | RHOM_11790 | RHOM_11775 | GntR domain protein; COG1802 Transcriptional regulators. | Stage II sporulation protein R. | 0.455 |
AEN97466.1 | AEN97464.1 | RHOM_11790 | RHOM_11780 | GntR domain protein; COG1802 Transcriptional regulators. | Spore germination protein-like protein YndE. | 0.540 |
AEN97466.1 | AEN97465.1 | RHOM_11790 | RHOM_11785 | GntR domain protein; COG1802 Transcriptional regulators. | Spore germination protein B1. | 0.567 |
AEN97466.1 | AEN97468.1 | RHOM_11790 | RHOM_11800 | GntR domain protein; COG1802 Transcriptional regulators. | Hypothetical protein. | 0.402 |
AEN97466.1 | ipk | RHOM_11790 | RHOM_11795 | GntR domain protein; COG1802 Transcriptional regulators. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.689 |
AEN97468.1 | AEN97466.1 | RHOM_11800 | RHOM_11790 | Hypothetical protein. | GntR domain protein; COG1802 Transcriptional regulators. | 0.402 |
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