Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN97493.1Hypothetical protein; COG1316 Transcriptional regulator. (392 aa)    
Predicted Functional Partners:
AEN96378.1
Cell envelope-related transcriptional attenuator; COG1316 Transcriptional regulator.
  
  
  0.917
AEN98288.1
Hypothetical protein; COG1316 Transcriptional regulator.
  
  
 
0.901
AEN97494.1
Undecaprenyl-phosphate glucose phosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
   
 0.858
AEN97492.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.819
AEN97491.1
Glycosyl transferase GT2 family protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
     
 0.776
AEN97495.1
COG1216 Predicted glycosyltransferases.
 
     0.619
AEN97496.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.602
AEN97490.1
Hypothetical protein.
       0.590
AEN97498.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
   
 0.505
AEN96953.1
Hypothetical protein.
  
     0.490
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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