Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97499.1Hypothetical protein; COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily). (307 aa)    
Predicted Functional Partners:
AEN95689.1
Hypothetical protein.
  
     0.729
AEN97575.1
Hypothetical protein; COG0489 ATPases involved in chromosome partitioning.
  
     0.687
AEN97577.1
Hypothetical protein.
 
     0.683
AEN95945.1
Hypothetical protein.
  
    0.648
AEN97464.1
Spore germination protein-like protein YndE.
  
     0.629
AEN97448.1
COG0845 Membrane-fusion protein.
  
     0.628
AEN97533.1
Hypothetical protein; COG4778 ABC-type phosphonate transport system, ATPase component.
 
     0.618
AEN97498.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.584
AEN97661.1
Hypothetical protein.
  
     0.564
AEN97513.1
GumG protein; COG3594 Fucose 4-O-acetylase and related acetyltransferases.
  
     0.563
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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