STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN97501.1Hypothetical protein; COG3682 Predicted transcriptional regulator. (124 aa)    
Predicted Functional Partners:
AEN97500.1
Methicillin resistance protein; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
 
  
 0.961
AEN98167.1
Beta-lactamase; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
 
  
 0.790
AEN95826.1
Heavy-metal transporting P-type ATPase; COG2217 Cation transport ATPase.
  
  
 0.734
AEN97229.1
COG2608 Copper chaperone.
  
  
 0.540
AEN97502.1
COG3274 Uncharacterized protein conserved in bacteria.
       0.486
AEN97503.1
Hypothetical protein.
       0.409
AEN97504.1
Teichoic acid glycosylation protein; COG2246 Predicted membrane protein.
       0.409
AEN97505.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.409
AEN97506.1
COG0019 Diaminopimelate decarboxylase.
       0.409
AEN97507.1
COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).
       0.409
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.