STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97543.1Na+/glutamate symporter-like protein; COG0786 Na+/glutamate symporter. (448 aa)    
Predicted Functional Partners:
AEN97544.1
Hypothetical protein; COG5263 FOG: Glucan-binding domain (YG repeat).
       0.727
AEN97542.1
Amidohydrolase; COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold.
 
     0.717
AEN97545.1
Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein.
       0.698
AEN97546.1
Hypothetical protein.
       0.698
AEN97541.1
N-acetylmuramidase/lysin; COG0860 N-acetylmuramoyl-L-alanine amidase.
  
    0.592
AEN97041.1
COG0067 Glutamate synthase domain 1.
      
 0.458
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.