STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97545.1Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein. (754 aa)    
Predicted Functional Partners:
AEN97546.1
Hypothetical protein.
       0.773
AEN97544.1
Hypothetical protein; COG5263 FOG: Glucan-binding domain (YG repeat).
       0.741
AEN97543.1
Na+/glutamate symporter-like protein; COG0786 Na+/glutamate symporter.
       0.698
AEN97547.1
Hypothetical protein; COG0110 Acetyltransferase (isoleucine patch superfamily).
  
  
 0.647
AEN97548.1
Glycosyl transferase, family 8; COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases.
 
     0.641
AEN97551.1
Glycosyl transferase; COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases.
 
     0.638
AEN97552.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
   
 0.633
AEN97494.1
Undecaprenyl-phosphate glucose phosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.623
AEN97563.1
Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.603
AEN97542.1
Amidohydrolase; COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold.
       0.587
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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