Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN97569.1Hypothetical protein; COG0438 Glycosyltransferase. (367 aa)    
Predicted Functional Partners:
AEN97570.1
COG0438 Glycosyltransferase.
 
     0.935
AEN97567.1
NAD-dependent epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
  
 0.884
AEN97568.1
A-glycosyltransferase; COG0438 Glycosyltransferase.
 
     0.884
AEN97575.1
Hypothetical protein; COG0489 ATPases involved in chromosome partitioning.
 
  
 0.850
AEN97576.1
Undecaprenyl-phosphate galactose phosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.785
AEN97571.1
Hypothetical protein.
       0.781
AEN97572.1
Hypothetical protein.
       0.773
AEN97577.1
Hypothetical protein.
 
     0.737
AEN97565.1
Putative glucosyltransferase; COG1216 Predicted glycosyltransferases.
 
    0.723
AEN97564.1
COG1216 Predicted glycosyltransferases.
 
  
 0.700
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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