STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97684.1Hypothetical protein; COG0534 Na+-driven multidrug efflux pump. (449 aa)    
Predicted Functional Partners:
AEN97685.1
Putative short-chain dehydrogenases/reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.773
AEN97686.1
Spore photoproduct; COG1533 DNA repair photolyase.
       0.762
AEN97687.1
Spore photoproduct.
       0.762
AEN97688.1
Hydrogenase accessory protein HypB2; COG0523 Putative GTPases (G3E family).
       0.762
AEN97689.1
COG4690 Dipeptidase.
       0.751
AEN97692.1
MATE family multidrug resistance protein; COG0534 Na+-driven multidrug efflux pump.
 
    
0.498
AEN97690.1
Hypothetical protein; COG4286 Uncharacterized conserved protein related to MYG1 family.
  
    0.486
AEN97691.1
COG5279 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain.
  
    0.486
AEN97682.1
Hypothetical protein; COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
       0.468
AEN97683.1
Hypothetical protein.
       0.468
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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