STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN97704.1FRG domain-containing protein. (286 aa)    
Predicted Functional Partners:
AEN97705.1
Hypothetical protein.
 
 
 0.800
rpoZ
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
  
 0.782
AEN97777.1
Hypothetical protein; COG0060 Isoleucyl-tRNA synthetase.
 
 
 0.702
AEN97774.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.672
AEN97779.1
Hypothetical protein; COG1349 Transcriptional regulators of sugar metabolism.
  
    0.672
AEN97771.1
Hypothetical protein; COG1067 Predicted ATP-dependent protease.
  
     0.653
AEN97703.1
COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen.
  
    0.649
AEN97541.1
N-acetylmuramidase/lysin; COG0860 N-acetylmuramoyl-L-alanine amidase.
  
     0.645
AEN95520.1
Efflux ABC transporter permease; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
     0.632
AEN96581.1
COG2052 Uncharacterized protein conserved in bacteria; Belongs to the RemA family.
  
    0.629
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.