Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97731.1COG4466 Uncharacterized protein conserved in bacteria. (80 aa)    
Predicted Functional Partners:
AEN97730.1
COG1388 FOG: LysM repeat.
       0.703
AEN97732.1
Hypothetical protein.
       0.501
AEN98248.1
Putative spore cortex-lytic enzyme; COG3103 SH3 domain protein.
  
     0.468
AEN97062.1
Hypothetical protein.
  
     0.436
AEN98429.1
DHH subfamily phosphodiesterase; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
  
    0.414
AEN97729.1
Hypothetical protein.
       0.412
AEN96507.1
Hypothetical protein; COG2882 Flagellar biosynthesis chaperone.
  
     0.407
AEN97362.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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