Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97780.1COG1484 DNA replication protein. (285 aa)    
Predicted Functional Partners:
AEN97779.1
Hypothetical protein; COG1349 Transcriptional regulators of sugar metabolism.
 
    0.947
AEN97777.1
Hypothetical protein; COG0060 Isoleucyl-tRNA synthetase.
 
   
 0.830
AEN97774.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
     0.725
AEN97778.1
Hypothetical protein.
       0.725
AEN97775.1
COG0642 Signal transduction histidine kinase.
 
    0.718
AEN98427.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.697
AEN97782.1
Hypothetical protein.
 
     0.695
AEN97771.1
Hypothetical protein; COG1067 Predicted ATP-dependent protease.
  
     0.690
AEN97199.1
Phage protein.
 
    0.675
AEN98206.1
Phage protein.
 
    0.675
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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