STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN97844.1Plasmid transfer factor-related protein; COG3505 Type IV secretory pathway, VirD4 components. (617 aa)    
Predicted Functional Partners:
AEN97845.1
Hypothetical protein.
 
     0.905
AEN97842.1
Hypothetical protein.
 
     0.887
AEN97837.1
Hypothetical protein; COG3451 Type IV secretory pathway, VirB4 components.
 
  
 0.872
AEN97843.1
Hypothetical protein.
 
     0.864
AEN97179.1
Hypothetical protein; COG3451 Type IV secretory pathway, VirB4 components.
 
  
 0.786
AEN97184.1
Hypothetical protein.
 
     0.771
AEN98185.1
Hypothetical protein; COG3451 Type IV secretory pathway, VirB4 components.
 
  
 0.766
AEN95495.1
Hypothetical protein; COG3451 Type IV secretory pathway, VirB4 components.
 
  
 0.765
AEN98187.1
Hypothetical protein.
 
     0.746
AEN97838.1
Hypothetical protein.
 
     0.720
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.