STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN97929.1Hypothetical protein. (547 aa)    
Predicted Functional Partners:
AEN97930.1
Metallophosphoesterase; COG0420 DNA repair exonuclease.
 
 
 0.951
AEN97928.1
COG0744 Membrane carboxypeptidase (penicillin-binding protein).
       0.614
AEN97966.1
COG1286 Uncharacterized membrane protein, required for colicin V production.
  
     0.517
AEN97931.1
Hypothetical protein.
       0.487
AEN96490.1
COG3906 Uncharacterized protein conserved in bacteria.
  
     0.477
AEN98265.1
Hypothetical protein.
  
     0.449
AEN97749.1
Hypothetical protein.
 
     0.432
AEN98256.1
Hypothetical protein; COG1716 FOG: FHA domain.
  
     0.426
AEN98262.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.