Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN97959.1Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component. (680 aa)    
Predicted Functional Partners:
AEN97960.1
Hypothetical protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.999
AEN97961.1
COG0642 Signal transduction histidine kinase.
 
 
 0.998
AEN97962.1
Hypothetical protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
     0.908
AEN97963.1
Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).
       0.512
AEN96570.1
Hypothetical protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
   0.466
AEN97956.1
ABC transporter ATP binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
   0.466
AEN95519.1
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
   0.459
AEN96409.1
Macrolide export ATP-binding/permease MacB; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
   0.459
AEN97164.1
Hypothetical protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
   0.459
AEN97804.1
Macrolide export ATP-binding/permease MacB; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
   0.459
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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