Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN98070.1Family 5 extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component. (559 aa)    
Predicted Functional Partners:
AEN98068.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.998
AEN98069.1
Hypothetical protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.998
AEN98067.1
COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.995
AEN95725.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.990
AEN95726.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.989
AEN95727.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.961
AEN95728.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.958
AEN98066.1
COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
  
 0.931
AEN95724.1
Extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
     
 
0.900
AEN95717.1
Hypothetical protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.885
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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