Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN98107.1ABC transporter related protein; COG1132 ABC-type multidrug transport system, ATPase and permease components. (603 aa)    
Predicted Functional Partners:
AEN98108.1
Hypothetical protein.
 
     0.816
AEN98109.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
    0.545
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.520
AEN95667.1
ABC transporter ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
 
  
0.471
AEN98106.1
Hypothetical protein.
       0.431
AEN97677.1
Amino-acid ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
     
0.430
AEN97429.1
COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.
  
  0.423
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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