Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN98117.1Transposase IS200-like protein; COG1943 Transposase and inactivated derivatives. (143 aa)    
Predicted Functional Partners:
AEN98114.1
COG3022 Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family.
       0.500
AEN98115.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C); COG1225 Peroxiredoxin.
       0.500
AEN98116.1
Hypothetical protein.
       0.500
AEN98118.1
Hypothetical protein.
       0.439
AEN98119.1
ATPase associated with various cellular activities AAA_5; COG1401 GTPase subunit of restriction endonuclease.
       0.439
AEN98120.1
Hypothetical protein.
       0.439
AEN98121.1
COG3513 Uncharacterized protein conserved in bacteria.
       0.435
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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