Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN98158.1Integrase/recombinase, XerC/CodV family protein; COG0582 Integrase; Belongs to the 'phage' integrase family. (410 aa)    
Predicted Functional Partners:
AEN98160.1
Hypothetical protein.
 
     0.862
AEN98156.1
Hypothetical protein.
 
     0.850
AEN98157.1
Hypothetical protein.
       0.768
AEN98155.1
Hypothetical protein; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair.
 
     0.713
AEN98159.1
Hypothetical protein.
       0.628
AEN98258.1
Hypothetical protein; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
 
     0.545
AEN98421.1
Hypothetical protein.
  
     0.541
AEN98418.1
Hypothetical protein.
  
     0.518
AEN98403.1
Hypothetical protein; COG0148 Enolase.
  
     0.471
AEN98405.1
Hypothetical protein.
  
     0.460
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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