Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN98170.1Hypothetical protein. (421 aa)    
Predicted Functional Partners:
AEN98173.1
Peptidoglycan glycosyltransferase; COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
     0.840
AEN98167.1
Beta-lactamase; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
  
     0.745
AEN98172.1
Hypothetical protein.
      
0.705
AEN98171.1
Hypothetical protein.
      
0.689
AEN98169.1
Hypothetical protein.
       0.596
AEN98168.1
Hypothetical protein.
       0.556
AEN97979.1
Hypothetical protein.
  
     0.524
AEN97289.1
Hypothetical protein.
  
     0.518
AEN96480.1
Hypothetical protein.
  
     0.457
AEN96667.1
Hypothetical protein.
  
     0.449
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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