Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEN98177.1Putative adenine-specific DNA methylase. (331 aa)    
Predicted Functional Partners:
AEN98179.1
COG0827 Adenine-specific DNA methylase.
     0.976
AEN98185.1
Hypothetical protein; COG3451 Type IV secretory pathway, VirB4 components.
 
     0.720
AEN98400.1
TRSE protein; COG3451 Type IV secretory pathway, VirB4 components.
 
     0.691
AEN98408.1
TraG/TraD family protein; COG3505 Type IV secretory pathway, VirD4 components.
 
     0.667
AEN95495.1
Hypothetical protein; COG3451 Type IV secretory pathway, VirB4 components.
 
     0.660
AEN98182.1
Hypothetical protein.
 
     0.636
AEN98178.1
RNA-directed DNA polymerase; COG3344 Retron-type reverse transcriptase.
 
    0.630
AEN98412.1
Hypothetical protein; COG3843 Type IV secretory pathway, VirD2 components (relaxase).
 
     0.611
AEN98238.1
Hypothetical protein; COG0119 Isopropylmalate/homocitrate/citramalate synthases.
 
     0.603
AEN98225.1
Conjugal transfer protein; COG3505 Type IV secretory pathway, VirD4 components.
 
     0.602
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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