STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN98188.1Hypothetical protein; COG1961 Site-specific recombinases, DNA invertase Pin homologs. (554 aa)    
Predicted Functional Partners:
AEN98189.1
Hypothetical protein.
 
     0.927
AEN95491.1
Hypothetical protein.
  
     0.686
AEN98190.1
Hypothetical protein; COG5545 Predicted P-loop ATPase and inactivated derivatives.
 
     0.650
AEN98192.1
Putative conjugal transfer protein.
 
     0.620
AEN95488.1
Putative conjugal transfer protein.
  
     0.545
AEN98194.1
Hypothetical protein.
 
     0.515
AEN98191.1
COG0358 DNA primase (bacterial type).
 
     0.501
AEN95467.1
Hypothetical protein; COG3655 Predicted transcriptional regulator.
  
     0.494
AEN95468.1
Hypothetical protein.
  
     0.463
AEN98195.1
Hypothetical protein; COG1349 Transcriptional regulators of sugar metabolism.
 
     0.463
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.