Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN98205.1COG1484 DNA replication protein. (287 aa)    
Predicted Functional Partners:
AEN98206.1
Phage protein.
 
    0.947
AEN98204.1
Hypothetical protein.
 
     0.879
AEN97199.1
Phage protein.
 
    0.779
AEN95463.1
Phage protein.
 
    0.719
AEN98427.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.697
AEN97197.1
Hypothetical protein.
 
     0.679
AEN98207.1
Hypothetical protein.
 
     0.671
AEN98211.1
Hypothetical protein.
  
     0.649
AEN97204.1
Hypothetical protein.
  
     0.627
AEN97203.1
Hypothetical protein.
  
     0.576
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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