Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEN95425.1 | AEN95455.1 | RHOM_01515 | RHOM_01665 | TRAG family protein; COG3505 Type IV secretory pathway, VirD4 components. | Hypothetical protein. | 0.688 |
AEN95425.1 | AEN95493.1 | RHOM_01515 | RHOM_01855 | TRAG family protein; COG3505 Type IV secretory pathway, VirD4 components. | Hypothetical protein. | 0.775 |
AEN95425.1 | AEN97184.1 | RHOM_01515 | RHOM_10365 | TRAG family protein; COG3505 Type IV secretory pathway, VirD4 components. | Hypothetical protein. | 0.754 |
AEN95425.1 | AEN97194.1 | RHOM_01515 | RHOM_10415 | TRAG family protein; COG3505 Type IV secretory pathway, VirD4 components. | Hypothetical protein. | 0.658 |
AEN95425.1 | AEN97842.1 | RHOM_01515 | RHOM_13680 | TRAG family protein; COG3505 Type IV secretory pathway, VirD4 components. | Hypothetical protein. | 0.752 |
AEN95425.1 | AEN98184.1 | RHOM_01515 | RHOM_15390 | TRAG family protein; COG3505 Type IV secretory pathway, VirD4 components. | Peptidase, M23 family protein; COG0739 Membrane proteins related to metalloendopeptidases. | 0.458 |
AEN95425.1 | AEN98185.1 | RHOM_01515 | RHOM_15395 | TRAG family protein; COG3505 Type IV secretory pathway, VirD4 components. | Hypothetical protein; COG3451 Type IV secretory pathway, VirB4 components. | 0.782 |
AEN95425.1 | AEN98187.1 | RHOM_01515 | RHOM_15405 | TRAG family protein; COG3505 Type IV secretory pathway, VirD4 components. | Hypothetical protein. | 0.770 |
AEN95425.1 | AEN98226.1 | RHOM_01515 | RHOM_15600 | TRAG family protein; COG3505 Type IV secretory pathway, VirD4 components. | COG3081 Nucleoid-associated protein. | 0.764 |
AEN95455.1 | AEN95425.1 | RHOM_01665 | RHOM_01515 | Hypothetical protein. | TRAG family protein; COG3505 Type IV secretory pathway, VirD4 components. | 0.688 |
AEN95455.1 | AEN95493.1 | RHOM_01665 | RHOM_01855 | Hypothetical protein. | Hypothetical protein. | 0.747 |
AEN95455.1 | AEN97184.1 | RHOM_01665 | RHOM_10365 | Hypothetical protein. | Hypothetical protein. | 0.755 |
AEN95455.1 | AEN97842.1 | RHOM_01665 | RHOM_13680 | Hypothetical protein. | Hypothetical protein. | 0.755 |
AEN95455.1 | AEN98185.1 | RHOM_01665 | RHOM_15395 | Hypothetical protein. | Hypothetical protein; COG3451 Type IV secretory pathway, VirB4 components. | 0.620 |
AEN95455.1 | AEN98187.1 | RHOM_01665 | RHOM_15405 | Hypothetical protein. | Hypothetical protein. | 0.769 |
AEN95455.1 | AEN98225.1 | RHOM_01665 | RHOM_15595 | Hypothetical protein. | Conjugal transfer protein; COG3505 Type IV secretory pathway, VirD4 components. | 0.722 |
AEN95455.1 | AEN98226.1 | RHOM_01665 | RHOM_15600 | Hypothetical protein. | COG3081 Nucleoid-associated protein. | 0.742 |
AEN95493.1 | AEN95425.1 | RHOM_01855 | RHOM_01515 | Hypothetical protein. | TRAG family protein; COG3505 Type IV secretory pathway, VirD4 components. | 0.775 |
AEN95493.1 | AEN95455.1 | RHOM_01855 | RHOM_01665 | Hypothetical protein. | Hypothetical protein. | 0.747 |
AEN95493.1 | AEN97194.1 | RHOM_01855 | RHOM_10415 | Hypothetical protein. | Hypothetical protein. | 0.741 |
page 1 of 5