STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN98248.1Putative spore cortex-lytic enzyme; COG3103 SH3 domain protein. (456 aa)    
Predicted Functional Partners:
AEN98280.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
  
 0.760
AEN98265.1
Hypothetical protein.
  
     0.700
AEN96082.1
COG3773 Cell wall hydrolyses involved in spore germination.
  
     0.699
AEN96375.1
Hypothetical protein.
  
     0.688
AEN95257.1
COG1345 Flagellar capping protein.
  
    0.668
AEN95593.1
Hypothetical protein; COG2919 Septum formation initiator.
  
     0.654
AEN96340.1
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
   
 0.651
AEN96887.1
COG3103 SH3 domain protein.
 
    0.644
AEN97062.1
Hypothetical protein.
  
     0.638
AEN97967.1
Hypothetical protein.
  
     0.613
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.