STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN98258.1Hypothetical protein; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases. (142 aa)    
Predicted Functional Partners:
AEN98259.1
Hypothetical protein.
 
     0.894
AEN96498.1
COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
  
  
 0.807
AEN98256.1
Hypothetical protein; COG1716 FOG: FHA domain.
 
   
 0.800
AEN96245.1
COG0658 Predicted membrane metal-binding protein.
  
  
 0.781
AEN96478.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.750
AEN96764.1
Hypothetical protein; COG0459 Chaperonin GroEL (HSP60 family).
  
     0.750
AEN98265.1
Hypothetical protein.
 
   
 0.736
AEN96241.1
COG1555 DNA uptake protein and related DNA-binding proteins.
   
  
 0.730
AEN96476.1
Hypothetical protein.
  
     0.716
AEN98260.1
Hypothetical protein.
 
     0.705
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.