STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN98262.1Hypothetical protein. (427 aa)    
Predicted Functional Partners:
AEN98264.1
COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.973
AEN98265.1
Hypothetical protein.
 
  
 0.965
AEN98260.1
Hypothetical protein.
 
   
 0.947
AEN98259.1
Hypothetical protein.
 
  
 0.941
AEN98263.1
Hypothetical protein.
 
     0.938
AEN98266.1
Hypothetical protein; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
 
  
 0.881
AEN98261.1
Hypothetical protein.
 
     0.874
AEN96478.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.725
AEN95847.1
Hypothetical protein.
  
     0.716
secE
Hypothetical protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.712
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.