Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN98276.1Hypothetical protein; COG3858 Predicted glycosyl hydrolase. (589 aa)    
Predicted Functional Partners:
AEN96244.1
Hypothetical protein.
  
     0.731
AEN98272.1
Hypothetical protein; COG4862 Negative regulator of genetic competence, sporulation and motility.
 
     0.710
AEN98277.1
Cell wall hydrolase/autolysin; COG0860 N-acetylmuramoyl-L-alanine amidase.
  
    0.700
AEN97590.1
Hypothetical protein.
  
     0.699
AEN96769.1
Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.681
AEN96641.1
Hypothetical protein.
  
     0.672
AEN95799.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.670
AEN96797.1
Hypothetical protein; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
  
     0.650
AEN96215.1
Hypothetical protein.
  
     0.646
AEN97461.1
Hypothetical protein.
  
     0.643
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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